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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2389Twitching motility protein PilT. (427 aa)    
Predicted Functional Partners:
DB31_6145
Type IV fimbrial assembly protein PilC.
 
  
 0.860
DB31_2738
Leader peptidase (Prepilin peptidase); Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.845
DB31_2735
Type IV pilus biogenesis protein PilM.
 
   
 0.809
DB31_2874
General secretion pathway protein F.
 
  
 0.792
DB31_0409
General secretion pathway protein F.
 
  
 0.789
DB31_3965
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
  
 0.750
DB31_0899
Type IV fimbrial assembly, ATPase PilB.
 
  
 0.715
DB31_5789
Hypothetical protein.
 
  
 0.704
DB31_5083
Type IV fimbrial assembly, ATPase PilB.
 
  
 0.685
DB31_0898
Putative ATPase.
 
  
 0.664
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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