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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2394Hypothetical protein. (506 aa)    
Predicted Functional Partners:
DB31_2396
RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.826
DB31_2395
Hypothetical protein.
       0.787
DB31_0268
TonB family protein.
  
    0.699
DB31_3354
TonB family protein.
  
    0.684
DB31_2819
Hypothetical protein.
  
    0.679
DB31_6885
TonB family protein.
  
    0.636
DB31_4113
TonB family protein.
  
    0.633
DB31_8008
Hypothetical protein.
  
     0.626
DB31_1239
RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.618
DB31_4978
Hypothetical protein.
  
     0.595
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.