DB31_2525 protein (Hyalangium minutum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

DB31_2525

Membrane protein. (168 aa)

Predicted Functional Partners:

DB31_8512

0.695

DB31_6664

0.630

DB31_7118

0.630

DB31_8513

0.630

DB31_1788

0.565

DB31_2247

0.565

DB31_2524

0.511

DB31_4169

0.496

mnmG

0.488

DB31_6248

0.457

Your Current Organism:

Hyalangium minutum

NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DB31_1788	DB31_2247	DB31_1788	DB31_2247	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	0.986
DB31_1788	DB31_2525	DB31_1788	DB31_2525	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	Membrane protein.	0.565
DB31_1788	DB31_4169	DB31_1788	DB31_4169	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	Hypothetical protein.	0.854
DB31_2247	DB31_1788	DB31_2247	DB31_1788	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	0.986
DB31_2247	DB31_2525	DB31_2247	DB31_2525	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	Membrane protein.	0.565
DB31_2247	DB31_4169	DB31_2247	DB31_4169	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	Hypothetical protein.	0.854
DB31_2524	DB31_2525	DB31_2524	DB31_2525	Hypothetical protein.	Membrane protein.	0.511
DB31_2525	DB31_1788	DB31_2525	DB31_1788	Membrane protein.	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	0.565
DB31_2525	DB31_2247	DB31_2525	DB31_2247	Membrane protein.	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	0.565
DB31_2525	DB31_2524	DB31_2525	DB31_2524	Membrane protein.	Hypothetical protein.	0.511
DB31_2525	DB31_4169	DB31_2525	DB31_4169	Membrane protein.	Hypothetical protein.	0.496
DB31_2525	DB31_6248	DB31_2525	DB31_6248	Membrane protein.	Mg(2+) transport ATPase, P-type.	0.457
DB31_2525	DB31_6664	DB31_2525	DB31_6664	Membrane protein.	Hypothetical protein.	0.630
DB31_2525	DB31_7118	DB31_2525	DB31_7118	Membrane protein.	Hypothetical protein.	0.630
DB31_2525	DB31_8512	DB31_2525	DB31_8512	Membrane protein.	Hypothetical protein.	0.695
DB31_2525	DB31_8513	DB31_2525	DB31_8513	Membrane protein.	Hypothetical protein.	0.630
DB31_2525	mnmG	DB31_2525	DB31_7813	Membrane protein.	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.	0.488
DB31_4169	DB31_1788	DB31_4169	DB31_1788	Hypothetical protein.	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	0.854
DB31_4169	DB31_2247	DB31_4169	DB31_2247	Hypothetical protein.	Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.	0.854
DB31_4169	DB31_2525	DB31_4169	DB31_2525	Hypothetical protein.	Membrane protein.	0.496