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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2573ABC transporter permease protein. (855 aa)    
Predicted Functional Partners:
DB31_4748
AttH component of AttEFGH ABC transport system.
  
 0.945
lolD
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
 0.738
DB31_3414
Hydroxyneurosporene synthase.
 
  
 0.704
DB31_2572
DNA-binding response regulator.
       0.685
DB31_4746
AttE component of AttEFGH ABC transport system.
 
 
 0.582
DB31_2574
Hypothetical protein.
       0.574
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.568
DB31_6604
ABC transporter, ATP-binding protein.
 
 
 0.556
DB31_0176
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.549
DB31_0063
ABC transporter, ATP-binding protein.
 
 
 0.536
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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