Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2579BatB. (352 aa)    
Predicted Functional Partners:
DB31_2582
Hypothetical protein.
 
    0.958
DB31_2577
BatD.
 
   
 0.956
DB31_2581
Hypothetical protein.
 
     0.948
DB31_2576
BatE.
 
     0.942
DB31_2583
MoxR-like ATPase in aerotolerance operon.
 
 
  0.926
DB31_2578
Hypothetical protein.
 
     0.879
DB31_2580
Hypothetical protein; BatA (Bacteroides aerotolerance operon).
 
    
0.865
lolD
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
       0.784
DB31_6793
Hypothetical protein.
 
    0.765
DB31_6959
Hypothetical protein.
 
    0.672
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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