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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2686Type II/IV secretion system secretin RcpA/CpaC. (218 aa)    
Predicted Functional Partners:
DB31_0885
Heat shock protein 22.5 (Hsp22.5).
 
  
 0.900
DB31_0883
Type II/IV secretion system protein TadC.
 
  
 0.798
DB31_5864
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein.
 
  
 0.791
DB31_3252
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein.
 
  
 0.787
DB31_6599
Heat shock protein 22.5 (Hsp22.5).
  
  
 0.761
DB31_0884
Flp pilus assembly protein TadB.
 
  
 0.709
DB31_0570
Hypothetical protein.
 
  
 0.695
DB31_1744
Polyhydroxyalkanoic acid synthase.
 
     0.680
DB31_4884
Hypothetical protein.
 
  
 0.668
DB31_6730
Hypothetical protein.
 
  
 0.668
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.