STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2724TPR domain protein. (1041 aa)    
Predicted Functional Partners:
DB31_2722
Hypothetical protein.
 
   
 0.890
DB31_2721
Outer membrane protein assembly factor YaeT precursor.
 
   
 0.863
DB31_2723
General secretion pathway protein A.
 
   
 0.860
DB31_2729
Hypothetical protein.
 
     0.802
DB31_9092
Hypothetical protein.
  
     0.769
DB31_2706
Hypothetical protein.
  
     0.766
DB31_7378
Hypothetical protein.
  
     0.765
DB31_8092
HAMP domain protein.
  
  
  0.762
DB31_3368
Hypothetical protein.
  
     0.757
DB31_8372
Cytosol aminopeptidase N-terminal domain protein.
  
     0.757
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.