Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2771Hypothetical protein. (883 aa)    
Predicted Functional Partners:
DB31_1943
PTS system, fructose-specific IIB component.
     
 0.835
DB31_5339
APHP domain protein.
 
     0.768
DB31_0265
Hypothetical protein.
 
     0.765
DB31_5765
Putative secreted glycosyl hydrolase.
 
     0.761
DB31_2613
Chitinase.
 
 
0.723
DB31_3450
Endo-1,4-beta-xylanase A precursor.
  
  
 0.700
DB31_4782
Putative secreted protein.
 
     0.683
DB31_6247
Hypothetical protein.
  
 
  0.636
DB31_5482
Glycosyltransferase.
  
  
 0.622
DB31_1140
SCP-like family protein.
   
 0.621
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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