Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3152Hypothetical protein. (707 aa)    
Predicted Functional Partners:
DB31_7747
Hypothetical protein.
  
  
  0.824
folE
GTP cyclohydrolase I.
    
 0.785
DB31_5289
Queuosine biosynthesis QueD, PTPS-I.
     
  0.758
DB31_1398
Queuosine biosynthesis QueD, PTPS-I.
     
  0.602
lipB
Octanoate-[acyl-carrier-protein]-protein-N- octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the Nudix hydrolase family.
     
  0.550
DB31_0658
Hypothetical protein.
 
  
 0.533
DB31_3153
Hypothetical protein.
       0.532
DB31_3154
Hypothetical protein.
       0.532
DB31_3155
Adenylate cyclase.
       0.529
DB31_7309
Hypothetical protein.
  
  
  0.513
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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