STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3353Flagellar motor rotation protein MotB. (271 aa)    
Predicted Functional Partners:
DB31_0049
Flagellar motor switch protein FliM.
 
  
 0.917
DB31_4135
Flagellar motor rotation protein MotB.
  
  
 
0.864
DB31_2779
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.860
DB31_0057
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
 
  
 0.846
DB31_0052
Flagellum-specific ATP synthase FliI.
 
  
 0.839
DB31_9005
Chemotaxis protein methyltransferase CheR.
  
 
 0.825
DB31_6099
OmpA domain protein.
  
 
 0.815
DB31_0044
Flagellar biosynthesis protein FlhB.
 
  
 0.813
DB31_1516
Hypothetical protein.
  
 
 0.811
DB31_0043
Flagellar biosynthesis protein FlhB.
 
  
 0.799
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.