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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3413Phytoene desaturase, neurosporene or lycopene producing. (482 aa)    
Predicted Functional Partners:
DB31_3414
Hydroxyneurosporene synthase.
 
 
 0.996
DB31_3411
Phytoene synthase.
 
 
 0.986
DB31_3223
Hydroxyneurosporene methyltransferase.
 
 
 0.940
DB31_3418
Acyltransferase domain protein.
 
  
 0.922
DB31_3416
Geranylgeranyl-diphosphate geranylgeranyl-transferase.
 
  
 0.905
DB31_3419
Transcriptional regulator, MerR family protein.
 
  
 0.850
DB31_3420
Transcriptional regulator, MerR family protein.
 
  
 0.850
DB31_3410
Phytoene dehydrogenase.
 
   
0.830
DB31_3415
Hypothetical protein.
    
 0.815
DB31_3417
Hypothetical protein.
       0.788
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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