Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
DB31_3419Transcriptional regulator, MerR family protein. (287 aa)    
Predicted Functional Partners:
DB31_5032
Glutamate synthase [NADPH] large chain.
    
 0.944
DB31_3413
Phytoene desaturase, neurosporene or lycopene producing.
 
  
 0.853
DB31_3410
Phytoene dehydrogenase.
 
  
 0.843
DB31_3411
Phytoene synthase.
 
   
 0.835
DB31_2328
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
 
 0.830
DB31_5177
B12 binding domain of Methylmalonyl-CoA mutase.
     
 0.824
DB31_3420
Transcriptional regulator, MerR family protein.
 
    
0.820
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.817
DB31_3416
Geranylgeranyl-diphosphate geranylgeranyl-transferase.
 
     0.814
DB31_3414
Hydroxyneurosporene synthase.
  
    0.788
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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