Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
DB31_3501TonB-dependent hemin, ferrichrome receptor. (637 aa)    
Predicted Functional Partners:
DB31_3500
Putative lipoprotein.
 
     0.923
DB31_3354
TonB family protein.
 
  0.747
DB31_0269
Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 0.726
DB31_0268
TonB family protein.
 
  0.699
DB31_4113
TonB family protein.
 
  0.668
DB31_6950
Ferric siderophore transport system, periplasmic binding protein TonB.
 
  0.664
DB31_1057
Isochorismatase.
  
  
 0.650
DB31_0271
MotA/TolQ/ExbB proton channel family protein.
 
  
 0.639
DB31_0435
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.636
DB31_6952
MotA/TolQ/ExbB proton channel family protein.
 
  
 0.621
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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