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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3579BNR repeat domain protein. (944 aa)    
Predicted Functional Partners:
DB31_3578
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
       0.581
DB31_3580
Putative alpha-dextrin endo-1, 6-alpha-glucosidase.
       0.508
DB31_7947
Hypothetical protein.
    
 0.464
DB31_3174
Serine protease, subtilase family protein.
 
 
  0.460
DB31_0478
NADH-ubiquinone oxidoreductase chain M.
    
 
 0.450
DB31_3687
NADH-ubiquinone oxidoreductase chain M.
    
 
 0.450
DB31_6498
Modular polyketide synthase; Belongs to the P-Pant transferase superfamily.
  
 
 
 0.439
DB31_0475
Sulfate transporter.
    
   0.420
DB31_5013
Carbonic anhydrase.
    
   0.420
secY
Preprotein translocase secY subunit protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.418
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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