Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3607Hypothetical protein. (370 aa)    
Predicted Functional Partners:
DB31_6142
Riboflavin kinase; Belongs to the ribF family.
    
 0.795
DB31_8376
Riboflavin synthase.
     
  0.790
DB31_1235
Phosphoglycolate phosphatase.
 
  
  0.737
DB31_3608
Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.608
DB31_8395
Hypothetical protein.
  
     0.588
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.574
DB31_4050
Hypothetical protein.
 
     0.568
DB31_5920
Hypothetical protein.
  
  
  0.550
DB31_7592
Hypothetical protein.
  
     0.538
DB31_6809
Membrane-anchored protein.
 
     0.517
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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