Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DB31_2599 | DB31_3655 | DB31_2599 | DB31_3655 | Putative lipoprotein. | Hypothetical protein. | 0.506 |
DB31_3059 | DB31_3655 | DB31_3059 | DB31_3655 | MOSC domain protein. | Hypothetical protein. | 0.606 |
DB31_3653 | DB31_3654 | DB31_3653 | DB31_3654 | Lipid A biosynthesis lauroyl acyltransferase. | Hypothetical protein. | 0.772 |
DB31_3653 | DB31_3655 | DB31_3653 | DB31_3655 | Lipid A biosynthesis lauroyl acyltransferase. | Hypothetical protein. | 0.808 |
DB31_3653 | DB31_3656 | DB31_3653 | DB31_3656 | Lipid A biosynthesis lauroyl acyltransferase. | Lipopolysaccharide ABC transporter, ATP-binding protein LptB. | 0.888 |
DB31_3653 | DB31_3657 | DB31_3653 | DB31_3657 | Lipid A biosynthesis lauroyl acyltransferase. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.434 |
DB31_3653 | astB | DB31_3653 | DB31_3652 | Lipid A biosynthesis lauroyl acyltransferase. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.580 |
DB31_3654 | DB31_3653 | DB31_3654 | DB31_3653 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase. | 0.772 |
DB31_3654 | DB31_3655 | DB31_3654 | DB31_3655 | Hypothetical protein. | Hypothetical protein. | 0.809 |
DB31_3654 | DB31_3656 | DB31_3654 | DB31_3656 | Hypothetical protein. | Lipopolysaccharide ABC transporter, ATP-binding protein LptB. | 0.809 |
DB31_3654 | DB31_3657 | DB31_3654 | DB31_3657 | Hypothetical protein. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.458 |
DB31_3654 | astB | DB31_3654 | DB31_3652 | Hypothetical protein. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.558 |
DB31_3655 | DB31_2599 | DB31_3655 | DB31_2599 | Hypothetical protein. | Putative lipoprotein. | 0.506 |
DB31_3655 | DB31_3059 | DB31_3655 | DB31_3059 | Hypothetical protein. | MOSC domain protein. | 0.606 |
DB31_3655 | DB31_3653 | DB31_3655 | DB31_3653 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase. | 0.808 |
DB31_3655 | DB31_3654 | DB31_3655 | DB31_3654 | Hypothetical protein. | Hypothetical protein. | 0.809 |
DB31_3655 | DB31_3656 | DB31_3655 | DB31_3656 | Hypothetical protein. | Lipopolysaccharide ABC transporter, ATP-binding protein LptB. | 0.969 |
DB31_3655 | DB31_3657 | DB31_3655 | DB31_3657 | Hypothetical protein. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.607 |
DB31_3655 | DB31_7108 | DB31_3655 | DB31_7108 | Hypothetical protein. | Hypothetical protein. | 0.531 |
DB31_3655 | DB31_9063 | DB31_3655 | DB31_9063 | Hypothetical protein. | Hypothetical protein. | 0.610 |
page 1 of 3