Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3764Cytochrome c552 precursor; Belongs to the cytochrome c-552 family. (173 aa)    
Predicted Functional Partners:
DB31_3765
Cytochrome c552 precursor.
 
     0.924
DB31_3011
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.915
DB31_6456
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.915
DB31_2539
Glutamine synthetase family protein.
     
 0.907
DB31_4105
Glutamine synthetase type I.
     
 0.907
DB31_0579
Enoyl- reductase.
     
  0.900
DB31_5243
Hypothetical protein.
  
 0.842
DB31_6441
Putative formate dehydrogenase oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.836
DB31_4279
Ferredoxin, 2Fe-2S.
   
 
 0.813
DB31_6661
Enoyl- reductase.
     
  0.780
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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