Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3845Cytosine/purine/uracil/thiamine/allantoin permease family protein. (536 aa)    
Predicted Functional Partners:
DB31_3841
Dihydropyrimidinase.
 
  
 0.901
DB31_3933
Allantoinase.
 
  
 0.841
DB31_3844
Dihydropyrimidine dehydrogenase.
 
  
 0.723
DB31_2208
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
 
  
 0.651
DB31_3846
Acetyltransferase, GNAT family protein.
       0.639
DB31_3842
N-carbamoylputrescine amidase.
 
     0.629
DB31_3937
Hypothetical protein.
 
     0.568
DB31_3847
Sensor histidine kinase.
       0.561
atpA
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
    0.522
DB31_3935
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase.
 
   
 0.519
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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