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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3873DNA-binding protein. (186 aa)    
Predicted Functional Partners:
DB31_4311
Capsular polysaccharide biosynthesis protein.
  
 
 0.947
DB31_0737
Hypothetical protein.
  
 
 0.793
DB31_3647
UDP-glucose dehydrogenase.
  
 
 0.715
DB31_0834
Glycosyl transferase, group 2 family protein.
  
 0.701
DB31_0835
Glycosyl transferase, group 2 family protein.
  
 0.701
DB31_4822
Mannose-1-phosphate guanylyltransferase.
  
 
 0.670
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.668
DB31_8168
Molybdopterin binding motif, CinA N-terminal domain protein; Belongs to the CinA family.
    
 0.667
DB31_4875
Hypothetical protein.
   
 
  0.638
DB31_6721
Ribosylnicotinamide kinase.
   
 
  0.638
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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