Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DB31_3941Serine/threonine protein kinase PrkC, regulator of stationary phase. (514 aa)    
Predicted Functional Partners:
DB31_0686
Putative protein phosphatase.
 
   0.782
DB31_4820
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.779
DB31_8119
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.776
DB31_3605
Hypothetical protein.
  
     0.773
DB31_4211
Hypothetical protein.
  
     0.773
DB31_4403
Hypothetical protein.
  
     0.773
DB31_6345
Hypothetical protein.
  
     0.773
DB31_6413
Serine/threonine-protein kinase pkn3.
  
     0.773
DB31_8985
Hypothetical protein.
  
     0.773
DB31_8484
Hypothetical protein.
  
     0.772
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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