Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_3944ABC-type Na+ efflux pump, permease component. (390 aa)    
Predicted Functional Partners:
DB31_3945
ABC-type Na+ transport system, ATPase component.
 
 
 0.997
DB31_3946
Hydrolase, alpha/beta hydrolase fold family protein.
 
     0.926
DB31_6901
ABC transporter, ATP-binding protein.
 
 
 0.876
DB31_3421
2OG-Fe(II) oxygenase family enzyme.
  
     0.631
DB31_3943
Hypothetical protein.
       0.558
DB31_3947
Hypothetical protein.
       0.551
DB31_5756
Vibriolysin, extracellular zinc protease.
  
 
   0.530
DB31_4566
ABC transporter, ATP-binding protein.
 
 
 0.479
DB31_6957
ABC transporter, ATP-binding protein.
 
 
 0.462
DB31_0697
ABC-type transporter, permease protein.
 
 
 0.438
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.