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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4010Flagellar motor rotation protein MotB. (544 aa)    
Predicted Functional Partners:
DB31_4009
Hypothetical protein.
 
   
 0.955
DB31_4816
Hypothetical protein.
  
     0.660
DB31_1156
Hypothetical protein.
  
     0.645
DB31_4135
Flagellar motor rotation protein MotB.
  
 
 0.645
DB31_8583
Hypothetical protein.
  
    0.633
purA-2
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.589
DB31_3704
Flagellar motor rotation protein MotB.
  
     0.584
DB31_5475
tolB protein precursor protein.
  
 0.565
DB31_6590
Hypothetical protein.
 
  0.555
DB31_8168
Molybdopterin binding motif, CinA N-terminal domain protein; Belongs to the CinA family.
    
  0.533
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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