Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4010Flagellar motor rotation protein MotB. (544 aa)    
Predicted Functional Partners:
DB31_4009
Hypothetical protein.
 
   
 0.935
DB31_4816
Hypothetical protein.
  
     0.660
DB31_1156
Hypothetical protein.
  
     0.645
DB31_8583
Hypothetical protein.
  
    0.634
DB31_4135
Flagellar motor rotation protein MotB.
  
 
 0.603
DB31_3704
Flagellar motor rotation protein MotB.
  
     0.584
purA-2
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.560
DB31_4380
High-affnity carbon uptake protein Hat/HatR.
  
  0.534
DB31_7171
Hypothetical protein.
  
 
 0.520
DB31_0608
Outer membrane protein A precursor.
  
     0.516
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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