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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4232Hypothetical protein. (408 aa)    
Predicted Functional Partners:
DB31_2733
Type IV pilus biogenesis protein PilO.
 
 
   0.965
DB31_2734
Type IV pilus biogenesis protein PilN.
  
 
   0.962
DB31_2735
Type IV pilus biogenesis protein PilM.
  
 
   0.959
DB31_2731
Type IV pilus biogenesis protein PilQ.
 
 
 
 0.954
DB31_7781
Type IV pilus biogenesis protein PilQ.
 
 
 
 0.953
DB31_2732
Type IV pilus biogenesis protein PilP.
 
 
   0.944
DB31_3783
Phage tail sheath protein FI.
  
 
 0.918
DB31_6145
Type IV fimbrial assembly protein PilC.
  
 
   0.873
DB31_6143
Type IV fimbrial assembly, ATPase PilB.
    
   0.852
DB31_3784
Hypothetical protein.
  
   0.831
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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