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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4366Beta-lactamase class C and other penicillin binding protein. (386 aa)    
Predicted Functional Partners:
DB31_3676
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.968
DB31_6587
Hypothetical protein.
  
 0.967
DB31_9001
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.963
DB31_6785
Beta-hexosaminidase.
 
 0.953
DB31_3663
Beta-hexosaminidase.
 
 0.941
DB31_4367
Muramoyltetrapeptide carboxypeptidase.
 
     0.923
DB31_4365
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase.
 
   
 0.857
DB31_4364
Thioredoxin family protein.
       0.772
DB31_4363
Inositol-1-monophosphatase.
       0.770
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.
 
  
 0.662
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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