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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4425Hypothetical protein. (346 aa)    
Predicted Functional Partners:
DB31_4424
Fe-S oxidoreductase-protein.
 
     0.849
DB31_4426
Hypothetical protein.
       0.773
DB31_4427
Tetratricopeptide repeat domain protein.
       0.773
DB31_0227
Radical SAM domain protein.
  
     0.720
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.697
DB31_1141
Heme biosynthesis protein.
  
     0.687
DB31_4428
1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase.
       0.566
DB31_0443
Nitric-oxide reductase.
  
  
 0.546
DB31_8028
PqqC-like protein.
  
  
 0.546
DB31_4422
Dehydrogenase flavoprotein LodB.
     
 0.475
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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