Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4541Milk-clotting protease. (255 aa)    
Predicted Functional Partners:
DB31_7737
Hypothetical protein.
  
     0.725
DB31_4540
Hypothetical protein.
     
 0.633
DB31_7282
Hypothetical protein.
  
     0.631
DB31_8512
Hypothetical protein.
  
     0.567
DB31_0285
Hypothetical protein.
  
     0.554
DB31_7371
Hypothetical protein.
  
     0.551
DB31_3069
Hypothetical protein.
  
     0.541
DB31_8080
Hypothetical protein.
  
     0.514
DB31_9044
Hypothetical protein.
  
     0.510
DB31_8836
SAM-dependent methyltransferase.
  
     0.468
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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