Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4558Chromosome partition protein smc. (559 aa)    
Predicted Functional Partners:
DB31_4559
Hypothetical protein.
       0.773
DB31_0073
tolB protein precursor protein; Involved in the tonb-independent uptake of group A colicins.
  
    0.768
DB31_8880
Hypothetical protein.
  
    0.765
DB31_5377
Chromosome partition protein smc.
  
     0.761
DB31_4293
Hypothetical protein.
  
     0.760
DB31_4241
Hypothetical protein.
 
     0.759
DB31_7043
Flagellar hook-length control protein FliK.
 
     0.759
DB31_3145
Hypothetical protein.
  
     0.758
DB31_1543
Cell division protein FtsK.
  
     0.757
DB31_8351
Hypothetical protein.
  
     0.756
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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