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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4643Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family. (352 aa)    
Predicted Functional Partners:
DB31_4641
Branched-chain amino acid transport ATP-binding protein LivF.
 
 0.999
DB31_4642
Branched-chain amino acid transport ATP-binding protein LivG.
 
 0.999
DB31_4644
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
DB31_4645
Branched-chain amino acid ABC transporter, amino acid-binding protein.
 
 
 0.999
DB31_1555
Branched-chain amino acid ABC transporter, amino acid-binding protein.
 
 
 0.997
DB31_1439
Hypothetical protein.
 
 
 0.994
DB31_5509
Branched-chain amino acid ABC transporter, amino acid-binding protein.
 
 
 0.990
DB31_7241
Hypothetical protein.
 
 
 0.986
DB31_3244
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
 
 0.968
DB31_5925
Cytochrome c family protein.
 
 
 0.879
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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