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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4686Hypothetical protein. (327 aa)    
Predicted Functional Partners:
DB31_4685
Hypothetical protein.
       0.798
DB31_4684
Sensor histidine kinase PrrB (RegB).
       0.787
DB31_4683
Dna binding response regulator PrrA (RegA).
       0.767
DB31_2802
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.730
DB31_2721
Outer membrane protein assembly factor YaeT precursor.
 
  
 0.673
DB31_8337
Outer membrane protein H precursor.
 
  
 0.658
DB31_6983
Outer membrane protein.
 
  
 0.633
DB31_2801
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
    0.617
DB31_8095
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.604
DB31_5032
Glutamate synthase [NADPH] large chain.
  
  
 0.577
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.