Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4792Hypothetical protein. (281 aa)    
Predicted Functional Partners:
DB31_4793
Hypothetical protein.
 
     0.946
DB31_4794
Cytochrome c551 peroxidase.
 
  
 0.877
DB31_3570
Menaquinone-cytochrome c reductase, cytochrome B subunit protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.797
DB31_5736
Hypothetical protein.
 
     0.789
DB31_5904
Hypothetical protein.
  
     0.740
DB31_3613
Hypothetical protein.
  
     0.689
DB31_7659
Putative Membrane Spanning Protein.
  
     0.680
DB31_1788
Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.
    
 0.641
DB31_2247
Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.
    
 0.641
DB31_0602
Membrane protein.
  
     0.638
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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