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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_4922Tetratricopeptide repeat protein. (461 aa)    
Predicted Functional Partners:
DB31_0737
Hypothetical protein.
 
 
0.941
DB31_2281
Hypothetical protein.
 
  
 0.840
DB31_6310
Hypothetical protein.
 
 
 0.815
DB31_6182
TPR domain protein, putative component of TonB system.
 
  
  0.805
DB31_4980
Tetratricopeptide repeat family protein.
 
  
  0.795
DB31_4356
Adenylate cyclase.
 
  
  0.785
DB31_4923
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.785
DB31_0616
Tetratricopeptide repeat protein.
 
 
   0.770
DB31_8446
Hypothetical protein.
 
     0.760
DB31_1618
TPR domain protein, putative component of TonB system.
 
  
  0.733
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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