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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_5002Small protein containing transglutaminase-like domain protein. (610 aa)    
Predicted Functional Partners:
DB31_6108
Hypothetical protein.
  
 0.856
DB31_6107
Hypothetical protein.
 
  
 0.849
DB31_5003
Large protein containing transglutaminase-like domain protein.
 
   
0.726
DB31_7826
Dimethylhistidine N-methyltransferase.
  
 
 0.692
DB31_3079
Hypothetical protein.
 
 
 0.563
DB31_2592
Hypothetical protein.
 
 
 0.559
DB31_1818
Hypothetical protein.
 
 
 0.557
DB31_5300
Hypothetical protein.
 
 
 0.554
DB31_7215
Hypothetical protein.
 
 
 0.548
DB31_4090
HEAT repeat protein.
  
     0.538
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.