Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DB31_1943 | DB31_4338 | DB31_1943 | DB31_4338 | PTS system, fructose-specific IIB component. | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.402 |
DB31_1943 | DB31_4996 | DB31_1943 | DB31_4996 | PTS system, fructose-specific IIB component. | Hypothetical protein. | 0.976 |
DB31_1943 | DB31_5211 | DB31_1943 | DB31_5211 | PTS system, fructose-specific IIB component. | Ribokinase. | 0.839 |
DB31_1943 | DB31_5929 | DB31_1943 | DB31_5929 | PTS system, fructose-specific IIB component. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.526 |
DB31_1943 | prs | DB31_1943 | DB31_0520 | PTS system, fructose-specific IIB component. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.402 |
DB31_2311 | DB31_4996 | DB31_2311 | DB31_4996 | 5-deoxy-glucuronate isomerase. | Hypothetical protein. | 0.693 |
DB31_2311 | DB31_5211 | DB31_2311 | DB31_5211 | 5-deoxy-glucuronate isomerase. | Ribokinase. | 0.801 |
DB31_4338 | DB31_1943 | DB31_4338 | DB31_1943 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | PTS system, fructose-specific IIB component. | 0.402 |
DB31_4338 | DB31_4996 | DB31_4338 | DB31_4996 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Hypothetical protein. | 0.649 |
DB31_4338 | DB31_5211 | DB31_4338 | DB31_5211 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Ribokinase. | 0.726 |
DB31_4338 | DB31_5929 | DB31_4338 | DB31_5929 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.803 |
DB31_4338 | apt | DB31_4338 | DB31_0691 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.427 |
DB31_4338 | guaA | DB31_4338 | DB31_5136 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.824 |
DB31_4338 | guaB | DB31_4338 | DB31_5134 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.571 |
DB31_4338 | prs | DB31_4338 | DB31_0520 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.957 |
DB31_4338 | purA-2 | DB31_4338 | DB31_3493 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.766 |
DB31_4996 | DB31_1943 | DB31_4996 | DB31_1943 | Hypothetical protein. | PTS system, fructose-specific IIB component. | 0.976 |
DB31_4996 | DB31_2311 | DB31_4996 | DB31_2311 | Hypothetical protein. | 5-deoxy-glucuronate isomerase. | 0.693 |
DB31_4996 | DB31_4338 | DB31_4996 | DB31_4338 | Hypothetical protein. | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.649 |
DB31_4996 | DB31_5211 | DB31_4996 | DB31_5211 | Hypothetical protein. | Ribokinase. | 0.786 |
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