STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_5944Peptidase, M50 family protein. (460 aa)    
Predicted Functional Partners:
DB31_4002
Hypothetical protein.
 
     0.639
DB31_4018
Hypothetical protein.
 
     0.602
DB31_5945
Fatty acid desaturase.
       0.560
DB31_5943
tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.558
DB31_6958
Hypothetical protein.
  
     0.493
DB31_3523
Tat (twin-arginine translocation) pathway signal sequence domain protein.
  
     0.478
DB31_5324
Hypothetical protein.
  
     0.471
DB31_1593
Hypothetical protein.
  
    0.470
DB31_5551
Hypothetical protein.
  
     0.453
DB31_4148
Hypothetical protein.
  
     0.418
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.