STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_6625Putative oxidoreductase. (367 aa)    
Predicted Functional Partners:
DB31_4872
Oxidoreductase, aldo/keto reductase family protein.
  
0.603
DB31_6718
Oxidoreductase, aldo/keto reductase family protein.
  
0.603
DB31_5637
Putative oxidoreductase.
  
     0.596
DB31_8623
Putative oxidoreductase.
 
0.535
DB31_8710
Oxidoreductase, aldo/keto reductase family protein.
 
0.535
DB31_8797
Oxidoreductase, aldo/keto reductase family protein.
 
0.534
DB31_6624
Transcriptional regulator, TetR family protein.
       0.532
DB31_7299
Putative oxidoreductase.
 
0.502
DB31_4936
Hypothetical protein.
    
 
 0.432
DB31_6856
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.432
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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