STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_6641Permeases of the major facilitator protein. (579 aa)    
Predicted Functional Partners:
rpmE
LSU ribosomal protein L31p; Binds the 23S rRNA.
   
    0.701
DB31_0343
Ferredoxin reductase.
   
  
 0.647
DB31_6640
Hypothetical protein.
       0.601
DB31_8376
Riboflavin synthase.
   
    0.599
DB31_7241
Hypothetical protein.
   
    0.565
DB31_2328
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.523
DB31_6498
Modular polyketide synthase; Belongs to the P-Pant transferase superfamily.
  
 
 0.480
DB31_6495
Hypothetical protein.
  
 
 0.463
DB31_5495
Membrane fusion component of tripartite multidrug resistance system.
 
 
 0.451
DB31_7569
Major facilitator family transporter.
  
   
 0.442
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.