Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DB31_0776 | DB31_3335 | Hypothetical protein. | Hypothetical protein. | 0.488 |
DB31_0776 | DB31_7125 | Hypothetical protein. | Phosphatidylinositol-specific phospholipase C. | 0.469 |
DB31_1140 | DB31_7125 | SCP-like family protein. | Phosphatidylinositol-specific phospholipase C. | 0.619 |
DB31_2613 | DB31_7125 | Chitinase. | Phosphatidylinositol-specific phospholipase C. | 0.682 |
DB31_3335 | DB31_0776 | Hypothetical protein. | Hypothetical protein. | 0.488 |
DB31_3335 | DB31_7125 | Hypothetical protein. | Phosphatidylinositol-specific phospholipase C. | 0.522 |
DB31_3335 | DB31_7495 | Hypothetical protein. | Glutamyl endopeptidase precursor; Belongs to the peptidase S1B family. | 0.739 |
DB31_3335 | DB31_8152 | Hypothetical protein. | Hypothetical protein. | 0.772 |
DB31_6774 | DB31_7125 | HIT family protein. | Phosphatidylinositol-specific phospholipase C. | 0.632 |
DB31_7120 | DB31_7125 | Hypothetical protein. | Phosphatidylinositol-specific phospholipase C. | 0.539 |
DB31_7123 | DB31_7124 | RNA polymerase sigma-70 factor, ECF subfamily protein. | Hypothetical protein. | 0.856 |
DB31_7123 | DB31_7125 | RNA polymerase sigma-70 factor, ECF subfamily protein. | Phosphatidylinositol-specific phospholipase C. | 0.513 |
DB31_7124 | DB31_7123 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily protein. | 0.856 |
DB31_7124 | DB31_7125 | Hypothetical protein. | Phosphatidylinositol-specific phospholipase C. | 0.513 |
DB31_7125 | DB31_0776 | Phosphatidylinositol-specific phospholipase C. | Hypothetical protein. | 0.469 |
DB31_7125 | DB31_1140 | Phosphatidylinositol-specific phospholipase C. | SCP-like family protein. | 0.619 |
DB31_7125 | DB31_2613 | Phosphatidylinositol-specific phospholipase C. | Chitinase. | 0.682 |
DB31_7125 | DB31_3335 | Phosphatidylinositol-specific phospholipase C. | Hypothetical protein. | 0.522 |
DB31_7125 | DB31_6774 | Phosphatidylinositol-specific phospholipase C. | HIT family protein. | 0.632 |
DB31_7125 | DB31_7120 | Phosphatidylinositol-specific phospholipase C. | Hypothetical protein. | 0.539 |
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