STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_7718tolB protein precursor protein. (1122 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.814
DB31_5032
Glutamate synthase [NADPH] large chain.
    
 0.750
DB31_4552
Hypothetical protein.
 
     0.685
DB31_0165
TonB-dependent receptor.
  
     0.665
hutH
Histidine ammonia-lyase.
  
  
 0.647
DB31_8070
Histidine ammonia-lyase.
  
  
 0.647
DB31_6324
Agmatinase; Belongs to the arginase family.
  
 
 0.641
DB31_1110
Hypothetical protein.
  
     0.624
DB31_6281
Hypothetical protein.
 
 
   0.586
DB31_5756
Vibriolysin, extracellular zinc protease.
  
     0.581
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.