STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_8486TPR repeat protein. (271 aa)    
Predicted Functional Partners:
DB31_4702
Two-component hybrid sensor and regulator.
   
 0.855
DB31_0737
Hypothetical protein.
 
 
 0.824
DB31_8485
Putative transporter.
       0.786
DB31_0616
Tetratricopeptide repeat protein.
  
   0.760
DB31_3208
Two-component hybrid sensor and regulator.
   
 0.724
DB31_0651
TPR domain protein, putative component of TonB system.
  
  
  0.713
DB31_1618
TPR domain protein, putative component of TonB system.
  
  
  0.709
DB31_3669
Hypothetical protein.
  
  
  0.703
DB31_7947
Hypothetical protein.
   
 0.683
DB31_6182
TPR domain protein, putative component of TonB system.
  
     0.682
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.