STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO59492.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
SEP17276.1
Hypothetical protein.
  
     0.767
SEP52054.1
Hypothetical protein.
  
     0.761
SEP24597.1
EspG family protein.
  
     0.759
SEP51969.1
Hypothetical protein.
  
     0.759
SEP52155.1
Hypothetical protein.
  
     0.748
SEP17588.1
EspG family protein.
  
     0.745
SEP52009.1
Hypothetical protein.
  
     0.730
SEP24610.1
EspG family protein.
  
     0.721
SEP27866.1
Protein of unknown function.
  
     0.720
SEP49358.1
Protein of unknown function.
  
     0.720
Your Current Organism:
Amycolatopsis saalfeldensis
NCBI taxonomy Id: 394193
Other names: A. saalfeldensis, Amycolatopsis saalfeldensis Carlsohn et al. 2007, DSM 44993, HKI 0457, JCM 14909, NRRL B-24474
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.