STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO77733.1Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. (1008 aa)    
Predicted Functional Partners:
SEP48378.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.999
SEP53571.1
Polyketide synthase 12.
 0.985
SEP53570.1
Erythronolide synthase.
 0.981
SEO46466.1
Acyl transferase domain-containing protein.
 0.978
SEO46491.1
Acyl transferase domain-containing protein.
 0.974
SEO77309.1
Polyketide synthase 12.
 0.973
SEP53569.1
Erythronolide synthase docking.
 0.973
SEO46972.1
Acyl transferase domain-containing protein.
 0.972
SEO75577.1
MbtH protein.
 
 0.972
SEO77535.1
Ketoacyl-synthetase C-terminal extension.
 0.968
Your Current Organism:
Amycolatopsis saalfeldensis
NCBI taxonomy Id: 394193
Other names: A. saalfeldensis, Amycolatopsis saalfeldensis Carlsohn et al. 2007, DSM 44993, HKI 0457, JCM 14909, NRRL B-24474
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.