Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO63776.1 | SEO77265.1 | SAMN04489732_101716 | SAMN04489732_10278 | Short chain dehydrogenase. | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 0.716 |
SEO63776.1 | SEO79397.1 | SAMN04489732_101716 | SAMN04489732_102178 | Short chain dehydrogenase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.735 |
SEO63776.1 | SEP48378.1 | SAMN04489732_101716 | SAMN04489732_11218 | Short chain dehydrogenase. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.900 |
SEO63776.1 | SEP48388.1 | SAMN04489732_101716 | SAMN04489732_11223 | Short chain dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.728 |
SEO63776.1 | SEP53431.1 | SAMN04489732_101716 | SAMN04489732_12727 | Short chain dehydrogenase. | [acyl-carrier-protein] S-malonyltransferase. | 0.514 |
SEO63776.1 | SEP53434.1 | SAMN04489732_101716 | SAMN04489732_12730 | Short chain dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.578 |
SEO77265.1 | SEO63776.1 | SAMN04489732_10278 | SAMN04489732_101716 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | Short chain dehydrogenase. | 0.716 |
SEO77265.1 | SEO79397.1 | SAMN04489732_10278 | SAMN04489732_102178 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.716 |
SEO77265.1 | SEO79414.1 | SAMN04489732_10278 | SAMN04489732_102179 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.944 |
SEO77265.1 | SEP37564.1 | SAMN04489732_10278 | SAMN04489732_10728 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Belongs to the thiolase-like superfamily. FabH family. | 0.911 |
SEO77265.1 | SEP48378.1 | SAMN04489732_10278 | SAMN04489732_11218 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SEO77265.1 | SEP48388.1 | SAMN04489732_10278 | SAMN04489732_11223 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | Amino acid adenylation domain-containing protein. | 0.999 |
SEO77265.1 | SEP53431.1 | SAMN04489732_10278 | SAMN04489732_12727 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | [acyl-carrier-protein] S-malonyltransferase. | 0.991 |
SEO77265.1 | SEP53434.1 | SAMN04489732_10278 | SAMN04489732_12730 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.975 |
SEO77265.1 | fabH | SAMN04489732_10278 | SAMN04489732_113167 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.911 |
SEO77265.1 | fabH-2 | SAMN04489732_10278 | SAMN04489732_12728 | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.911 |
SEO79397.1 | SEO63776.1 | SAMN04489732_102178 | SAMN04489732_101716 | 3-oxoacyl-[acyl-carrier protein] reductase. | Short chain dehydrogenase. | 0.735 |
SEO79397.1 | SEO77265.1 | SAMN04489732_102178 | SAMN04489732_10278 | 3-oxoacyl-[acyl-carrier protein] reductase. | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 0.716 |
SEO79397.1 | SEO79414.1 | SAMN04489732_102178 | SAMN04489732_102179 | 3-oxoacyl-[acyl-carrier protein] reductase. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.770 |
SEO79397.1 | SEP37564.1 | SAMN04489732_102178 | SAMN04489732_10728 | 3-oxoacyl-[acyl-carrier protein] reductase. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Belongs to the thiolase-like superfamily. FabH family. | 0.784 |
page 1 of 5