STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO83931.1Putative multiple sugar transport system substrate-binding protein. (366 aa)    
Predicted Functional Partners:
SEO83888.1
Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SEO83905.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.960
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.875
SEP35754.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.822
araB
L-ribulokinase.
 
     0.811
SEO83982.1
L-ribulose 5-phosphate 4-epimerase.
 
  
 0.758
SEP52174.1
Fructose transport system ATP-binding protein.
 
 0.678
SEP35744.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.669
SEP50254.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.660
SEP51597.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.649
Your Current Organism:
Amycolatopsis saalfeldensis
NCBI taxonomy Id: 394193
Other names: A. saalfeldensis, Amycolatopsis saalfeldensis Carlsohn et al. 2007, DSM 44993, HKI 0457, JCM 14909, NRRL B-24474
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