STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP26158.1Acetyltransferase (GNAT) family protein. (242 aa)    
Predicted Functional Partners:
SEO65158.1
Acetyltransferase (GNAT) family protein.
  
     0.769
SEP33001.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
  0.606
SEP52826.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
  0.606
SEP54289.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
  
     0.604
SEP53154.1
Hypothetical protein.
  
     0.598
SEP26172.1
Hypothetical protein.
       0.580
SEP51720.1
N-acetylmuramoyl-L-alanine amidase.
  
    0.561
SEP00431.1
L-fucose isomerase.
  
     0.538
SEP53581.1
Hypothetical protein.
  
     0.530
SEP51928.1
Hypothetical protein.
  
     0.528
Your Current Organism:
Amycolatopsis saalfeldensis
NCBI taxonomy Id: 394193
Other names: A. saalfeldensis, Amycolatopsis saalfeldensis Carlsohn et al. 2007, DSM 44993, HKI 0457, JCM 14909, NRRL B-24474
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.