STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP38944.1Beta-lactamase enzyme family protein. (197 aa)    
Predicted Functional Partners:
SEP38937.1
Beta-lactamase enzyme family protein.
     0.973
SEP38951.1
Sugar phosphate permease.
 
     0.865
SEP38921.1
Beta-lactamase class A.
 
  
 
0.830
SEP52760.1
Beta-lactamase class A.
  
  
 
0.705
SEP38994.1
Dihydroorotase.
 
     0.679
SEO90385.1
Beta-lactamase class A.
    
  0.657
SEP38876.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
 
  
  0.647
SEP38929.1
CubicO group peptidase, beta-lactamase class C family.
 
  
  0.644
SEP38977.1
Predicted acetyltransferase, GNAT superfamily.
 
     0.643
SEP38960.1
DNA-binding transcriptional regulator, PucR family.
 
     0.631
Your Current Organism:
Amycolatopsis saalfeldensis
NCBI taxonomy Id: 394193
Other names: A. saalfeldensis, Amycolatopsis saalfeldensis Carlsohn et al. 2007, DSM 44993, HKI 0457, JCM 14909, NRRL B-24474
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.