Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO46996.1 | SEO47070.1 | SAMN04489732_101129 | SAMN04489732_101133 | Malonyl CoA-acyl carrier protein transacylase. | Glutamate mutase subunit E. | 0.996 |
SEO46996.1 | SEO57989.1 | SAMN04489732_101129 | SAMN04489732_101500 | Malonyl CoA-acyl carrier protein transacylase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.867 |
SEO46996.1 | SEO77265.1 | SAMN04489732_101129 | SAMN04489732_10278 | Malonyl CoA-acyl carrier protein transacylase. | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 0.992 |
SEO46996.1 | SEO77309.1 | SAMN04489732_101129 | SAMN04489732_10281 | Malonyl CoA-acyl carrier protein transacylase. | Polyketide synthase 12. | 0.992 |
SEO46996.1 | SEP48378.1 | SAMN04489732_101129 | SAMN04489732_11218 | Malonyl CoA-acyl carrier protein transacylase. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SEO46996.1 | SEP52071.1 | SAMN04489732_101129 | SAMN04489732_118167 | Malonyl CoA-acyl carrier protein transacylase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.698 |
SEO46996.1 | SEP52072.1 | SAMN04489732_101129 | SAMN04489732_118168 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.700 |
SEO46996.1 | SEP52073.1 | SAMN04489732_101129 | SAMN04489732_118169 | Malonyl CoA-acyl carrier protein transacylase. | MaoC like domain-containing protein. | 0.824 |
SEO46996.1 | SEP53570.1 | SAMN04489732_101129 | SAMN04489732_12857 | Malonyl CoA-acyl carrier protein transacylase. | Erythronolide synthase. | 0.998 |
SEO46996.1 | SEP53571.1 | SAMN04489732_101129 | SAMN04489732_12860 | Malonyl CoA-acyl carrier protein transacylase. | Polyketide synthase 12. | 0.998 |
SEO47070.1 | SEO46996.1 | SAMN04489732_101133 | SAMN04489732_101129 | Glutamate mutase subunit E. | Malonyl CoA-acyl carrier protein transacylase. | 0.996 |
SEO47070.1 | SEO57989.1 | SAMN04489732_101133 | SAMN04489732_101500 | Glutamate mutase subunit E. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.867 |
SEO47070.1 | SEO77265.1 | SAMN04489732_101133 | SAMN04489732_10278 | Glutamate mutase subunit E. | KS-AT-KR-ACP domain-containing polyene macrolide polyketide synthase. | 0.992 |
SEO47070.1 | SEO77309.1 | SAMN04489732_101133 | SAMN04489732_10281 | Glutamate mutase subunit E. | Polyketide synthase 12. | 0.992 |
SEO47070.1 | SEP48378.1 | SAMN04489732_101133 | SAMN04489732_11218 | Glutamate mutase subunit E. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SEO47070.1 | SEP52071.1 | SAMN04489732_101133 | SAMN04489732_118167 | Glutamate mutase subunit E. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.698 |
SEO47070.1 | SEP52072.1 | SAMN04489732_101133 | SAMN04489732_118168 | Glutamate mutase subunit E. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.700 |
SEO47070.1 | SEP52073.1 | SAMN04489732_101133 | SAMN04489732_118169 | Glutamate mutase subunit E. | MaoC like domain-containing protein. | 0.824 |
SEO47070.1 | SEP53570.1 | SAMN04489732_101133 | SAMN04489732_12857 | Glutamate mutase subunit E. | Erythronolide synthase. | 0.998 |
SEO47070.1 | SEP53571.1 | SAMN04489732_101133 | SAMN04489732_12860 | Glutamate mutase subunit E. | Polyketide synthase 12. | 0.998 |
page 1 of 6