STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP52558.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (457 aa)    
Predicted Functional Partners:
SEP52557.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.971
SEP52556.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.962
SEP52554.1
BadF-type ATPase.
 
    0.938
SEP52555.1
6-phospho-beta-glucosidase.
 
     0.919
SEP52630.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.862
SEP21701.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.832
SEP52559.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
    0.831
SEP51200.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.828
SEO88491.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.827
SEP51833.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.805
Your Current Organism:
Amycolatopsis saalfeldensis
NCBI taxonomy Id: 394193
Other names: A. saalfeldensis, Amycolatopsis saalfeldensis Carlsohn et al. 2007, DSM 44993, HKI 0457, JCM 14909, NRRL B-24474
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.