STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI64306.1PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0945 lysine exporter family protein (LysE/YggA). (207 aa)    
Predicted Functional Partners:
ABI67273.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: nha:Nham_0452 lysine exporter protein (LysE/YggA).
  
     0.764
ABI64305.1
PFAM: 20S proteasome, A and B subunits; KEGG: jan:Jann_2679 20S proteasome, A and B subunits.
       0.686
ABI64304.1
PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: jan:Jann_2678 transglutaminase-like.
  
    0.588
ABI64302.1
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: nar:Saro_2775 protein of unknown function DUF404.
       0.586
ABI64303.1
PFAM: protein of unknown function DUF403; KEGG: sme:SMb20887 hypothetical protein.
       0.586
ABI64309.1
KEGG: ccr:CC1538 hypothetical protein.
 
     0.563
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
       0.559
ABI64308.1
PFAM: glycosyl transferase, family 39; KEGG: bja:blr4440 hypothetical protein.
  
    0.499
ABI64307.1
PFAM: glycosyl transferase, family 2; KEGG: gox:GOX1109 dolichol-phosphate mannosyltransferase.
       0.497
ABI64846.1
PFAM: protein of unknown function DUF6, transmembrane; KEGG: atc:AGR_C_3767 hypothetical protein.
 
   
 0.435
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.