STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI64506.1KEGG: hch:HCH_05427 hypothetical protein. (268 aa)    
Predicted Functional Partners:
ABI64505.1
PFAM: Patched family protein; KEGG: hch:HCH_05429 predicted exporters of the RND superfamily.
  
 0.979
ABI64507.1
KEGG: hch:HCH_05426 hypothetical protein.
 
     0.949
ABI64970.1
KEGG: sde:Sde_1321 exporter of the RND superfamily.
  
 0.804
ABI64968.1
KEGG: cps:CPS_1654 hypothetical protein.
 
     0.738
ABI64504.1
KEGG: hch:HCH_05430 rhodanese-related sulfurtransferase.
 
     0.729
ABI65589.1
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: ccr:CC1876 N-acetylmuramoyl-L-alanine amidase.
    
   0.601
ABI65668.1
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: ccr:CC1930 conserved hypothetical protein.
 
 
 
 0.453
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.