STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI64652.1PFAM: peptidase M28; KEGG: eli:ELI_12345 hypothetical protein. (567 aa)    
Predicted Functional Partners:
ABI66102.1
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: eli:ELI_01455 hypothetical protein.
  
     0.722
ABI65396.1
PFAM: peptidase M20; peptidase M28; KEGG: sdn:Sden_2728 peptidase M28.
 
     0.672
ABI66794.1
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: eli:ELI_01440 TonB-dependent receptor.
  
     0.671
ABI64661.1
KEGG: ilo:IL0583 Oar-like outer membrane protein protein, OmpA family.
  
     0.633
ABI66398.1
Dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S09B; PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: ccr:CC2154 dipeptidyl peptidase IV.
  
    0.590
ABI65985.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bfs:BF1608 putative HlyD-family transporter component.
  
     0.589
ABI66901.1
PFAM: peptidase M16 domain protein; KEGG: ilo:IL1537 peptidase, M16 family.
  
     0.577
ABI64608.1
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: eli:ELI_05030 TonB-dependent receptor.
  
     0.564
ABI64520.1
PFAM: Carboxylesterase, type B; KEGG: ccr:CC0799 para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
 
 0.537
ABI67333.1
PFAM: LytTr DNA-binding region; KEGG: xac:XAC1874 regulatory protein.
  
     0.521
Your Current Organism:
Maricaulis maris
NCBI taxonomy Id: 394221
Other names: M. maris MCS10, Maricaulis maris MCS10, Maricaulis maris str. MCS10, Maricaulis maris strain MCS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.